Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf4118 domain-containing protein | EJD96_RS13910 | Not Available | + | 3088554 - 3089039 | 18540.7 |
| histidine kinase | EJD96_RS13915 | Not Available | + | 3089161 - 3089595 | 16593.0 |
| lysr family transcriptional regulator | EJD96_RS13920 | Not Available | - | 3089607 - 3090524 | 32773.1 |
| n-acetyl-gamma-glutamyl-phosphate reductase | EJD96_RS13925 | Not Available | + | 3090700 - 3091629 | 33027.5 |
| hypothetical protein | EJD96_RS13930 | Not Available | + | 3091865 - 3092098 | 8598.35 |
| trap transporter substrate-binding protein | EJD96_RS13935 | Not Available | - | 3092120 - 3093154 | 37875.9 |
| zinc-dependent alcohol dehydrogenase family protein | EJD96_RS13940 | Not Available | - | 3093205 - 3094329 | 39074.6 |
| hpch/hpai aldolase/citrate lyase family protein | EJD96_RS13945 | Not Available | - | 3094385 - 3095218 | 29333.5 |
| caib/baif coa transferase family protein | EJD96_RS13950 | Not Available | - | 3095215 - 3096405 | 43039.2 |
| acyl-coa dehydrogenase family protein | EJD96_RS13955 | Not Available | - | 3096431 - 3097597 | 43300.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.