Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJD96_RS11905 | Not Available | - | 2631629 - 2631970 | 11761.3 |
| hypothetical protein | EJD96_RS11910 | Not Available | - | 2631967 - 2632770 | 29349.9 |
| baseplate j/gp47 family protein | EJD96_RS11915 | Not Available | - | 2632742 - 2636602 | 141481.0 |
| gpw/gp25 family protein | EJD96_RS11920 | Not Available | - | 2636652 - 2637077 | 15785.8 |
| paar domain-containing protein | EJD96_RS11925 | Not Available | - | 2637086 - 2637388 | 9854.45 |
| type vi secretion system tip protein vgrg | EJD96_RS11930 | Not Available | - | 2637414 - 2639204 | 63108.9 |
| cis tube protein | EJD96_RS11935 | Not Available | - | 2639209 - 2639895 | 25307.7 |
| duf5908 family protein | EJD96_RS11940 | Not Available | - | 2639896 - 2640108 | 7718.14 |
| phage tail protein | EJD96_RS11945 | Not Available | - | 2640112 - 2640576 | 17391.7 |
| phage tail protein | EJD96_RS11950 | Not Available | - | 2640594 - 2641052 | 17144.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.