Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| response regulator | EJD96_RS11795 | Not Available | - | 2604451 - 2604726 | 10087.5 |
| is3 family transposase | EJD96_RS11800 | Not Available | + | 2604814 - 2605919 | 42104.8 |
| tyrosine-type recombinase/integrase | EJD96_RS11805 | Not Available | - | 2606181 - 2607185 | 36500.7 |
| dna-binding protein | EJD96_RS11810 | Not Available | + | 2607356 - 2608417 | 38780.4 |
| arsenical resistance protein arsh | EJD96_RS11825 | Not Available | - | 2608766 - 2609503 | 27635.2 |
| arsenate reductase (glutaredoxin) | EJD96_RS11830 | Not Available | - | 2609469 - 2609897 | 15550.8 |
| arsenic transporter | EJD96_RS11835 | Not Available | - | 2609921 - 2611201 | 45141.6 |
| arsr/smtb family transcription factor | EJD96_RS11840 | Not Available | - | 2611214 - 2611549 | 11686.1 |
| type ii toxin-antitoxin system mqsa family antitoxin | EJD96_RS11845 | Not Available | + | 2611753 - 2612166 | 14480.6 |
| bifunctional enoyl-coa hydratase/phosphate acetyltransferase | EJD96_RS11850 | Not Available | + | 2612221 - 2613675 | 51278.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.