Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pha/phb synthase family protein | EJD96_RS11745 | Not Available | + | 2585200 - 2586972 | 64834.6 |
| type ii toxin-antitoxin system mqsa family antitoxin | EJD96_RS11750 | Not Available | + | 2586974 - 2587333 | 12961.6 |
| tn3 family transposase | EJD96_RS11755 | Not Available | - | 2587367 - 2590333 | 112430.0 |
| hypothetical protein | EJD96_RS11760 | Not Available | + | 2590748 - 2590966 | 8130.96 |
| 3'-5' exonuclease | EJD96_RS11765 | Not Available | + | 2591101 - 2591685 | 21375.0 |
| 3'-5' exoribonuclease | EJD96_RS11770 | Not Available | + | 2591697 - 2592188 | 19043.6 |
| gh36-type glycosyl hydrolase domain-containing protein | EJD96_RS11775 | Not Available | - | 2592503 - 2601064 | 312528.0 |
| hypothetical protein | EJD96_RS11780 | Not Available | - | 2601420 - 2601725 | 11499.7 |
| hypothetical protein | EJD96_RS11785 | Not Available | - | 2601799 - 2602035 | 9233.44 |
| hypothetical protein | EJD96_RS11790 | Not Available | - | 2602915 - 2603154 | 8690.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.