Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJD96_RS11690 | Not Available | + | 2577785 - 2578543 | 26704.8 |
| response regulator transcription factor | EJD96_RS11695 | Not Available | + | 2578565 - 2579230 | 24160.4 |
| atp-binding protein | EJD96_RS11700 | Not Available | + | 2579206 - 2580591 | 50469.9 |
| cytochrome b | EJD96_RS11705 | Not Available | + | 2580601 - 2581149 | 20117.2 |
| 3'-5' exoribonuclease | EJD96_RS11710 | Not Available | - | 2581445 - 2581921 | 18586.9 |
| type ii toxin-antitoxin system mqsa family antitoxin | EJD96_RS11720 | Not Available | - | 2582213 - 2582398 | 6840.07 |
| universal stress protein | EJD96_RS11725 | Not Available | - | 2582456 - 2582896 | 15717.8 |
| l,d-transpeptidase | EJD96_RS11730 | Not Available | + | 2583119 - 2583913 | 28620.4 |
| hypothetical protein | EJD96_RS11735 | Not Available | - | 2583948 - 2584547 | 21743.1 |
| trar/dksa family transcriptional regulator | EJD96_RS11740 | Not Available | + | 2584871 - 2585203 | 12593.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.