Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| family 2a encapsulin nanocompartment shell protein | EJD96_RS11540 | Not Available | - | 2520151 - 2521083 | 34461.1 |
| helix-turn-helix domain-containing protein | EJD96_RS11545 | Not Available | - | 2521159 - 2521476 | 11505.0 |
| serine o-acetyltransferase epsc | EJD96_RS11550 | Not Available | - | 2521486 - 2522409 | 32892.4 |
| rhodanese-like domain-containing protein | EJD96_RS11555 | Not Available | - | 2522467 - 2522973 | 17825.3 |
| tonb-dependent siderophore receptor | EJD96_RS11560 | Not Available | + | 2523409 - 2525886 | 89754.9 |
| rna polymerase factor sigma-70 | EJD96_RS11565 | Not Available | + | 2525967 - 2526503 | 20299.1 |
| mbth family protein | EJD96_RS11570 | Not Available | + | 2526669 - 2526890 | 8297.73 |
| thioesterase ii family protein | EJD96_RS11575 | Not Available | + | 2526894 - 2527646 | 27476.0 |
| 4'-phosphopantetheinyl transferase family protein | EJD96_RS11580 | Not Available | + | 2527636 - 2528328 | 24878.8 |
| taud/tfda family dioxygenase | EJD96_RS11585 | Not Available | + | 2528334 - 2529362 | 38155.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.