Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent protease atpase subunit hslu | EJD96_RS01240 | Not Available | + | 197209 - 198555 | 50137.3 |
| hypothetical protein | EJD96_RS01245 | Not Available | + | 198578 - 198781 | 7344.74 |
| porin | EJD96_RS01250 | Not Available | + | 199103 - 200275 | 40126.6 |
| tetratricopeptide repeat protein | EJD96_RS01255 | Not Available | + | 200795 - 202336 | 56756.4 |
| tonb-dependent receptor | EJD96_RS01260 | Not Available | - | 202390 - 204504 | 76452.8 |
| type ii secretion system major pseudopilin gspg | EJD96_RS01265 | Not Available | - | 204730 - 205197 | 17417.7 |
| iron donor protein cyay | EJD96_RS01270 | Not Available | - | 205307 - 205639 | 12028.9 |
| lps translocon maturation chaperone lptm | EJD96_RS01275 | Not Available | + | 205689 - 205907 | 7352.9 |
| diaminopimelate decarboxylase | EJD96_RS01280 | Not Available | + | 205967 - 207259 | 46270.5 |
| phage tail protein | EJD96_RS01285 | Not Available | + | 207575 - 208504 | 31899.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.