Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| yeee/yede family protein | EJD96_RS11440 | Not Available | - | 2493716 - 2494135 | 14484.7 |
| yeee/yede family protein | EJD96_RS11445 | Not Available | - | 2494151 - 2494585 | 14566.4 |
| arsr/smtb family transcription factor | EJD96_RS11450 | Not Available | - | 2494588 - 2494914 | 12245.0 |
| hypothetical protein | EJD96_RS11455 | Not Available | - | 2495019 - 2495225 | 7838.44 |
| lysr family transcriptional regulator | EJD96_RS11460 | Not Available | - | 2495365 - 2496285 | 34144.9 |
| nadh-quinone oxidoreductase subunit l | EJD96_RS11465 | Not Available | + | 2496394 - 2497962 | 55817.9 |
| ybcc family protein | EJD96_RS11470 | Not Available | + | 2497984 - 2500500 | 91057.7 |
| carboxymuconolactone decarboxylase family protein | EJD96_RS11475 | Not Available | - | 2500586 - 2501206 | 23123.8 |
| metq/nlpa family abc transporter substrate-binding protein | EJD96_RS11480 | Not Available | + | 2501543 - 2502349 | 29160.1 |
| methionine abc transporter atp-binding protein | EJD96_RS11485 | Not Available | + | 2502381 - 2503550 | 41938.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.