Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter permease | EJD96_RS11340 | Not Available | + | 2471586 - 2472251 | 24314.7 |
| amino acid abc transporter atp-binding protein | EJD96_RS11345 | Not Available | + | 2472251 - 2473024 | 27368.8 |
| formimidoylglutamate deiminase | EJD96_RS11350 | Not Available | + | 2473098 - 2474546 | 52207.3 |
| universal stress protein | EJD96_RS11355 | Not Available | + | 2474814 - 2475251 | 15376.9 |
| na+/h+ antiporter nhaa | EJD96_RS11360 | Not Available | + | 2475487 - 2476680 | 41038.5 |
| hypothetical protein | EJD96_RS11365 | Not Available | + | 2476989 - 2477282 | 10624.8 |
| hypothetical protein | EJD96_RS11370 | Not Available | + | 2477366 - 2477545 | 6965.49 |
| sugar abc transporter substrate-binding protein | EJD96_RS11375 | Not Available | + | 2477801 - 2478745 | 33214.5 |
| sugar abc transporter atp-binding protein | EJD96_RS11380 | Not Available | + | 2478837 - 2480405 | 56130.2 |
| abc transporter permease | EJD96_RS11385 | Not Available | + | 2480457 - 2481443 | 34209.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.