Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| murr/rpir family transcriptional regulator | EJD96_RS11290 | Not Available | + | 2459403 - 2460242 | 30736.0 |
| ribose-5-phosphate isomerase rpia | EJD96_RS11295 | Not Available | + | 2460306 - 2461019 | 26042.5 |
| sugar abc transporter substrate-binding protein | EJD96_RS11300 | Not Available | + | 2461186 - 2462274 | 39835.8 |
| sugar abc transporter atp-binding protein | EJD96_RS11305 | Not Available | + | 2462330 - 2463835 | 54351.8 |
| abc transporter permease | EJD96_RS11310 | Not Available | + | 2463864 - 2464892 | 35684.1 |
| 2-methylaconitate cis-trans isomerase prpf | EJD96_RS11315 | Not Available | - | 2464995 - 2466185 | 41582.8 |
| fe/s-dependent 2-methylisocitrate dehydratase acnd | EJD96_RS11320 | Not Available | - | 2466182 - 2468803 | 95679.2 |
| gntr family transcriptional regulator | EJD96_RS11325 | Not Available | - | 2468858 - 2469589 | 27147.4 |
| iclr family transcriptional regulator | EJD96_RS11330 | Not Available | + | 2469841 - 2470578 | 26853.6 |
| glutamine abc transporter substrate-binding protein | EJD96_RS11335 | Not Available | + | 2470733 - 2471488 | 27656.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.