Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna ligase | EJD96_RS11240 | Not Available | - | 2449093 - 2450760 | 61569.9 |
| ligase-associated dna damage response exonuclease | EJD96_RS11245 | Not Available | - | 2450753 - 2451820 | 38440.5 |
| hdod domain-containing protein | EJD96_RS11250 | Not Available | + | 2452113 - 2453045 | 33759.8 |
| hypothetical protein | EJD96_RS11255 | Not Available | - | 2453163 - 2453474 | 11479.6 |
| transporter | EJD96_RS11260 | Not Available | + | 2453582 - 2454322 | 26409.2 |
| hypothetical protein | EJD96_RS11265 | Not Available | + | 2454440 - 2454646 | 7797.11 |
| sdr family nad(p)-dependent oxidoreductase | EJD96_RS11270 | Not Available | - | 2454756 - 2455508 | 26254.7 |
| aldehyde dehydrogenase family protein | EJD96_RS11275 | Not Available | + | 2455694 - 2457169 | 52033.9 |
| xylulokinase | EJD96_RS11280 | Not Available | + | 2457172 - 2458695 | 52755.1 |
| had hydrolase-like protein | EJD96_RS11285 | Not Available | + | 2458692 - 2459393 | 25070.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.