Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJD96_RS11190 | Not Available | - | 2435424 - 2435726 | 11186.0 |
| thiamine pyrophosphate-binding protein | EJD96_RS11195 | Not Available | - | 2435730 - 2437424 | 60054.1 |
| ku protein | EJD96_RS11200 | Not Available | + | 2437639 - 2438688 | 38758.3 |
| dna ligase d | EJD96_RS11205 | Not Available | + | 2438685 - 2441261 | 94937.2 |
| nucleotide excision repair endonuclease | EJD96_RS11210 | Not Available | + | 2441431 - 2442543 | 40982.8 |
| hypothetical protein | EJD96_RS11215 | Not Available | + | 2442569 - 2443930 | 48442.9 |
| alpha/beta hydrolase family protein | EJD96_RS11220 | Not Available | - | 2443981 - 2444970 | 35246.2 |
| transporter substrate-binding domain-containing protein | EJD96_RS11225 | Not Available | - | 2445012 - 2445809 | 28060.1 |
| ligase-associated dna damage response endonuclease pdem | EJD96_RS11230 | Not Available | - | 2445871 - 2446527 | 23749.6 |
| ligase-associated dna damage response dexh box helicase | EJD96_RS11235 | Not Available | - | 2446524 - 2449091 | 94496.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.