Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| kgg domain-containing protein | EJD96_RS11140 | Not Available | + | 2428220 - 2428564 | 11700.2 |
| fic family protein | EJD96_RS11145 | Not Available | - | 2428785 - 2430290 | 56674.5 |
| yoak family protein | EJD96_RS11150 | Not Available | - | 2430390 - 2431142 | 26662.4 |
| hypothetical protein | EJD96_RS11155 | Not Available | + | 2431365 - 2431601 | 8136.6 |
| cbs domain-containing protein | EJD96_RS11160 | Not Available | - | 2431900 - 2432412 | 18566.3 |
| semisweet family transporter | EJD96_RS11165 | Not Available | + | 2432655 - 2432927 | 10161.3 |
| duf4142 domain-containing protein | EJD96_RS11170 | Not Available | + | 2433086 - 2433658 | 20410.4 |
| hypothetical protein | EJD96_RS11175 | Not Available | + | 2433778 - 2434020 | 9187.24 |
| type ii toxin-antitoxin system mqsa family antitoxin | EJD96_RS11180 | Not Available | - | 2434443 - 2434970 | 19009.4 |
| hypothetical protein | EJD96_RS11185 | Not Available | - | 2435042 - 2435266 | 8354.38 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.