Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| porin | EJD96_RS11040 | Not Available | - | 2405659 - 2406780 | 39395.2 |
| peptidyl-prolyl cis-trans isomerase | EJD96_RS11045 | Not Available | - | 2407275 - 2408051 | 28403.3 |
| bola family protein | EJD96_RS11050 | Not Available | - | 2408143 - 2408427 | 10275.1 |
| septation protein a | EJD96_RS11055 | Not Available | - | 2408424 - 2409044 | 23357.4 |
| peptide-methionine (r)-s-oxide reductase msrb | EJD96_RS11060 | Not Available | - | 2409093 - 2409488 | 14927.4 |
| protein adenylyltransferase selo | EJD96_RS11065 | Not Available | - | 2409535 - 2411022 | 55204.6 |
| branched-chain amino acid abc transporter permease | EJD96_RS11070 | Not Available | + | 2411151 - 2412086 | 32941.9 |
| branched-chain amino acid abc transporter permease | EJD96_RS11075 | Not Available | + | 2412089 - 2413297 | 42684.2 |
| abc transporter atp-binding protein | EJD96_RS11080 | Not Available | + | 2413294 - 2414052 | 27384.3 |
| abc transporter atp-binding protein | EJD96_RS11085 | Not Available | + | 2414045 - 2414761 | 25595.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.