Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system vapc family toxin | EJD96_RS10940 | Not Available | + | 2379261 - 2379677 | 14960.1 |
| hypothetical protein | EJD96_RS10945 | Not Available | - | 2379702 - 2380004 | 10896.2 |
| acyclic terpene utilization atua family protein | EJD96_RS10950 | Not Available | - | 2380006 - 2381361 | 47322.5 |
| citmhs family transporter | EJD96_RS10955 | Not Available | - | 2381404 - 2382705 | 45985.6 |
| lysr family transcriptional regulator | EJD96_RS10960 | Not Available | + | 2382889 - 2383905 | 36814.6 |
| mfs transporter | EJD96_RS10965 | Not Available | - | 2383909 - 2385570 | 59740.7 |
| tigr03364 family fad-dependent oxidoreductase | EJD96_RS10970 | Not Available | - | 2386006 - 2387208 | 43551.5 |
| putative 2-aminoethylphosphonate abc transporter substrate-binding protein | EJD96_RS10975 | Not Available | - | 2387507 - 2388538 | 37345.8 |
| putative 2-aminoethylphosphonate abc transporter permease subunit | EJD96_RS10980 | Not Available | - | 2388620 - 2390362 | 63231.8 |
| putative 2-aminoethylphosphonate abc transporter atp-binding protein | EJD96_RS10985 | Not Available | - | 2390374 - 2391453 | 39881.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.