Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| muramoyltetrapeptide carboxypeptidase | EJD96_RS10890 | Not Available | + | 2366476 - 2367477 | 35896.2 |
| duf1439 domain-containing protein | EJD96_RS10895 | Not Available | - | 2367499 - 2368071 | 21129.5 |
| abc-f family atpase | EJD96_RS10900 | Not Available | + | 2368316 - 2369914 | 58969.4 |
| quinolinate synthase nada | EJD96_RS10905 | Not Available | + | 2369952 - 2371091 | 40847.0 |
| carboxylating nicotinate-nucleotide diphosphorylase | EJD96_RS10910 | Not Available | + | 2371088 - 2371993 | 31932.4 |
| mase1 domain-containing protein | EJD96_RS10915 | Not Available | + | 2372114 - 2373364 | 44552.0 |
| patatin-like phospholipase family protein | EJD96_RS10920 | Not Available | - | 2373374 - 2375650 | 81970.8 |
| l-aspartate oxidase | EJD96_RS10925 | Not Available | - | 2375655 - 2377259 | 58452.7 |
| formate-dependent phosphoribosylglycinamide formyltransferase | EJD96_RS10930 | Not Available | - | 2377426 - 2378637 | 43346.3 |
| fita-like ribbon-helix-helix domain-containing protein | EJD96_RS10935 | Not Available | + | 2379010 - 2379264 | 9289.13 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.