Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| restriction endonuclease | EJD96_RS10835 | Not Available | - | 2358073 - 2358921 | 32343.3 |
| helix-turn-helix domain-containing protein | EJD96_RS24280 | Not Available | + | 2359443 - 2359586 | 5032.94 |
| type ii toxin-antitoxin system rnla family toxin | EJD96_RS10850 | Not Available | + | 2360139 - 2361212 | 40107.1 |
| type ii toxin-antitoxin system rnlb family antitoxin | EJD96_RS10855 | Not Available | + | 2361213 - 2361551 | 12287.9 |
| udp-glucose 4-epimerase family protein | EJD96_RS10860 | Not Available | - | 2362084 - 2363031 | 34153.4 |
| cupin domain-containing protein | EJD96_RS10865 | Not Available | - | 2363140 - 2363550 | 15180.9 |
| duf72 domain-containing protein | EJD96_RS10870 | Not Available | + | 2363687 - 2364601 | 35266.1 |
| 7-carboxy-7-deazaguanine synthase | EJD96_RS10875 | Not Available | + | 2364744 - 2365379 | 23345.0 |
| 6-carboxytetrahydropterin synthase qued | EJD96_RS10880 | Not Available | + | 2365473 - 2365919 | 16649.0 |
| trna adenosine(34) deaminase tada | EJD96_RS10885 | Not Available | + | 2365982 - 2366476 | 17550.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.