Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| luxr family transcriptional regulator | EJD96_RS10780 | Not Available | - | 2345445 - 2346425 | 37311.5 |
| hypothetical protein | EJD96_RS10790 | Not Available | + | 2346732 - 2347616 | 32504.1 |
| trak family protein | EJD96_RS10795 | Not Available | + | 2347659 - 2348000 | 12578.1 |
| plasmid mobilization protein | EJD96_RS10800 | Not Available | + | 2348286 - 2348672 | 13983.2 |
| duf6388 family protein | EJD96_RS10805 | Not Available | - | 2348725 - 2349033 | 12120.3 |
| recombinase family protein | EJD96_RS10810 | Not Available | + | 2349381 - 2350004 | 22796.4 |
| class i sam-dependent dna methyltransferase | EJD96_RS10815 | Not Available | + | 2350001 - 2352787 | 103252.0 |
| dead/deah box helicase | EJD96_RS10820 | Not Available | + | 2352784 - 2354838 | 75870.9 |
| giy-yig nuclease family protein | EJD96_RS10825 | Not Available | + | 2354831 - 2356015 | 43615.6 |
| hypothetical protein | EJD96_RS10830 | Not Available | + | 2356364 - 2357683 | 48617.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.