Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | EJD96_RS10730 | Not Available | - | 2334895 - 2336316 | 52707.5 |
| response regulator transcription factor | EJD96_RS10735 | Not Available | - | 2336318 - 2337007 | 25460.7 |
| tetratricopeptide repeat protein | EJD96_RS10740 | Not Available | + | 2337325 - 2338911 | 57781.7 |
| ssra-binding protein smpb | EJD96_RS10745 | Not Available | - | 2338965 - 2339414 | 17212.9 |
| type ii toxin-antitoxin system rata family toxin | EJD96_RS10750 | Not Available | + | 2339482 - 2339913 | 16494.7 |
| rnfh family protein | EJD96_RS10755 | Not Available | + | 2339906 - 2340211 | 11238.8 |
| imp dehydrogenase | EJD96_RS10760 | Not Available | + | 2340342 - 2341811 | 52212.0 |
| glutamine-hydrolyzing gmp synthase | EJD96_RS10765 | Not Available | + | 2341925 - 2343517 | 58348.2 |
| tyrosine-type recombinase/integrase | EJD96_RS10770 | Not Available | + | 2343825 - 2345021 | 45679.1 |
| helix-turn-helix transcriptional regulator | EJD96_RS10775 | Not Available | - | 2345087 - 2345323 | 8869.93 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.