Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribosome recycling factor | EJD96_RS10630 | Not Available | + | 2314447 - 2315007 | 20755.2 |
| polyprenyl diphosphate synthase | EJD96_RS10635 | Not Available | + | 2315194 - 2315952 | 28316.0 |
| phosphatidate cytidylyltransferase | EJD96_RS10640 | Not Available | + | 2315952 - 2316779 | 29717.3 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | EJD96_RS10645 | Not Available | + | 2316815 - 2317987 | 41209.8 |
| rip metalloprotease rsep | EJD96_RS10650 | Not Available | + | 2317984 - 2319357 | 49297.7 |
| outer membrane protein assembly factor bama | EJD96_RS10655 | Not Available | + | 2319513 - 2321888 | 87786.6 |
| omph family outer membrane protein | EJD96_RS10660 | Not Available | + | 2321970 - 2322443 | 18059.4 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | EJD96_RS10665 | Not Available | + | 2322579 - 2323667 | 37919.3 |
| 3-hydroxyacyl-acp dehydratase fabz | EJD96_RS10670 | Not Available | + | 2323660 - 2324124 | 17290.9 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | EJD96_RS10675 | Not Available | + | 2324328 - 2325116 | 28208.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.