Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| succinyl-diaminopimelate desuccinylase | EJD96_RS10530 | Not Available | - | 2283358 - 2284485 | 40530.3 |
| arsc family reductase | EJD96_RS10535 | Not Available | - | 2284488 - 2284847 | 13516.2 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | EJD96_RS10540 | Not Available | - | 2284969 - 2285802 | 29713.4 |
| succinyldiaminopimelate transaminase | EJD96_RS10545 | Not Available | - | 2285860 - 2287071 | 44511.3 |
| methyl-accepting chemotaxis protein | EJD96_RS10550 | Not Available | + | 2287399 - 2289198 | 62832.2 |
| chromosome segregation protein smc | EJD96_RS10555 | Not Available | + | 2289441 - 2292971 | 132504.0 |
| cell division protein zipa c-terminal ftsz-binding domain-containing protein | EJD96_RS10560 | Not Available | + | 2293365 - 2294690 | 47422.1 |
| nad-dependent dna ligase liga | EJD96_RS10565 | Not Available | + | 2294714 - 2296780 | 74680.1 |
| utp--glucose-1-phosphate uridylyltransferase galu | EJD96_RS10570 | Not Available | + | 2296853 - 2297743 | 32316.3 |
| peptide deformylase | EJD96_RS10575 | Not Available | + | 2297826 - 2298362 | 20084.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.