Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alanine racemase | EJD96_RS10480 | Not Available | + | 2272828 - 2273907 | 38081.8 |
| dna repair protein rada | EJD96_RS10485 | Not Available | + | 2273985 - 2275370 | 48898.2 |
| flagellar protein flhe | EJD96_RS10490 | Not Available | - | 2275386 - 2275946 | 19672.4 |
| sensor histidine kinase | EJD96_RS10495 | Not Available | - | 2275939 - 2277300 | 50423.3 |
| two-component system response regulator ompr | EJD96_RS10500 | Not Available | - | 2277338 - 2278099 | 28629.5 |
| hypothetical protein | EJD96_RS10505 | Not Available | + | 2278319 - 2278600 | 10278.3 |
| amino acid abc transporter permease | EJD96_RS10510 | Not Available | - | 2278708 - 2279367 | 23853.1 |
| cystine abc transporter substrate-binding protein | EJD96_RS10515 | Not Available | - | 2279460 - 2280263 | 28400.2 |
| atp-binding cassette domain-containing protein | EJD96_RS10520 | Not Available | - | 2280401 - 2282383 | 73835.4 |
| 50s ribosomal protein l3 n(5)-glutamine methyltransferase | EJD96_RS10525 | Not Available | - | 2282438 - 2283328 | 32964.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.