Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | + | 2264086 - 2264179 | Not Available |
| aspartate kinase | EJD96_RS10435 | Not Available | - | 2264323 - 2265576 | 44639.8 |
| duf4148 domain-containing protein | EJD96_RS10440 | Not Available | - | 2266028 - 2266309 | 9933.67 |
| lysr family transcriptional regulator | EJD96_RS10445 | Not Available | + | 2266537 - 2267448 | 33471.4 |
| thioredoxin family protein | EJD96_RS10450 | Not Available | - | 2267471 - 2267899 | 16357.2 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | EJD96_RS10455 | Not Available | + | 2268010 - 2268729 | 25000.7 |
| ribosomal protein s18-alanine n-acetyltransferase | EJD96_RS10460 | Not Available | + | 2268726 - 2269223 | 18317.0 |
| uracil-dna glycosylase | EJD96_RS10465 | Not Available | + | 2269220 - 2270233 | 36377.7 |
| duf1853 family protein | EJD96_RS10470 | Not Available | + | 2270238 - 2271275 | 37762.5 |
| lysophospholipid transporter lplt | EJD96_RS10475 | Not Available | - | 2271323 - 2272594 | 45802.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.