Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit omega | EJD96_RS10380 | Not Available | - | 2253762 - 2253965 | 7431.25 |
| guanylate kinase | EJD96_RS10385 | Not Available | - | 2254025 - 2254663 | 23495.1 |
| yicc/yloc family endoribonuclease | EJD96_RS10390 | Not Available | - | 2254749 - 2255663 | 33719.8 |
| ribonuclease ph | EJD96_RS10395 | Not Available | + | 2255989 - 2256717 | 26037.1 |
| rdgb/ham1 family non-canonical purine ntp pyrophosphatase | EJD96_RS10400 | Not Available | + | 2256883 - 2257473 | 20771.6 |
| radical sam family heme chaperone hemw | EJD96_RS10405 | Not Available | + | 2257470 - 2258714 | 46001.0 |
| eal and hdod domain-containing protein | EJD96_RS10410 | Not Available | + | 2258857 - 2260056 | 44139.2 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | EJD96_RS10415 | Not Available | + | 2260062 - 2262113 | 75966.4 |
| superoxide dismutase family protein | EJD96_RS10420 | Not Available | + | 2262340 - 2262867 | 18173.8 |
| serine endopeptidase | EJD96_RS10425 | Not Available | + | 2262917 - 2263960 | 39747.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.