Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fluoride efflux transporter crcb | EJD96_RS10280 | Not Available | + | 2228425 - 2228799 | 13342.4 |
| atp-dependent chaperone clpb | EJD96_RS10285 | Not Available | + | 2228905 - 2231490 | 95039.4 |
| diguanylate cyclase | EJD96_RS10290 | Not Available | + | 2232018 - 2233700 | 62603.9 |
| ribonuclease e activity regulator rraa | EJD96_RS10295 | Not Available | + | 2233733 - 2234224 | 17017.4 |
| fusc family membrane protein | EJD96_RS10300 | Not Available | - | 2234265 - 2236496 | 83732.6 |
| isocitrate lyase | EJD96_RS10305 | Not Available | + | 2236909 - 2238213 | 47480.2 |
| sulfate/molybdate abc transporter atp-binding protein | EJD96_RS10310 | Not Available | - | 2238620 - 2239288 | 24475.6 |
| molybdate abc transporter permease subunit | EJD96_RS10315 | Not Available | - | 2239313 - 2239987 | 23883.9 |
| molybdate abc transporter substrate-binding protein | EJD96_RS10320 | Not Available | - | 2240009 - 2240779 | 26766.1 |
| winged helix-turn-helix domain-containing protein | EJD96_RS10325 | Not Available | + | 2240934 - 2241305 | 13177.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.