Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gluconate:h+ symporter | EJD96_RS10230 | Not Available | + | 2217300 - 2218670 | 47558.2 |
| molybdopterin synthase catalytic subunit moae | EJD96_RS10235 | Not Available | + | 2218739 - 2219191 | 16764.9 |
| nramp family divalent metal transporter | EJD96_RS10240 | Not Available | + | 2219256 - 2220602 | 48075.0 |
| type ii toxin-antitoxin system hipa family toxin | EJD96_RS10245 | Not Available | + | 2220679 - 2221968 | 47196.5 |
| helix-turn-helix transcriptional regulator | EJD96_RS10250 | Not Available | + | 2221969 - 2222256 | 10513.0 |
| hlyd family secretion protein | EJD96_RS10255 | Not Available | - | 2222311 - 2223285 | 35833.9 |
| duf1656 domain-containing protein | EJD96_RS10260 | Not Available | - | 2223351 - 2223551 | 7339.39 |
| fusc family protein | EJD96_RS10265 | Not Available | - | 2223541 - 2225745 | 80073.8 |
| efflux transporter outer membrane subunit | EJD96_RS10270 | Not Available | - | 2225742 - 2227205 | 51913.9 |
| lysr family transcriptional regulator | EJD96_RS10275 | Not Available | + | 2227424 - 2228404 | 36308.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.