Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf47 domain-containing protein | EJD96_RS10130 | Not Available | + | 2194858 - 2195484 | 23542.5 |
| inorganic phosphate transporter | EJD96_RS10135 | Not Available | + | 2195546 - 2196553 | 35467.3 |
| phoh family protein | EJD96_RS10140 | Not Available | - | 2196658 - 2198358 | 62166.6 |
| peroxiredoxin | EJD96_RS10145 | Not Available | - | 2198752 - 2199228 | 17726.3 |
| polysaccharide deacetylase family protein | EJD96_RS10150 | Not Available | - | 2199276 - 2200217 | 34646.4 |
| bifunctional udp-4-keto-pentose/udp-xylose synthase | EJD96_RS10155 | Not Available | - | 2200511 - 2201566 | 39740.7 |
| formyltransferase | EJD96_RS10160 | Not Available | - | 2201596 - 2202513 | 33461.2 |
| glycosyltransferase | EJD96_RS10165 | Not Available | - | 2202510 - 2203466 | 35864.6 |
| degt/dnrj/eryc1/strs family aminotransferase | EJD96_RS10170 | Not Available | - | 2203664 - 2204785 | 40783.2 |
| eama family transporter | EJD96_RS10175 | Not Available | - | 2204890 - 2205261 | 13041.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.