Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| flagellar filament capping protein flid | EJD96_RS10080 | Not Available | - | 2184097 - 2186169 | 69666.7 |
| flagellar protein flag | EJD96_RS10085 | Not Available | - | 2186396 - 2186755 | 12248.5 |
| flagellin | EJD96_RS10090 | Not Available | - | 2186834 - 2187922 | 37345.4 |
| tetratricopeptide repeat protein | EJD96_RS10095 | Not Available | - | 2188255 - 2190231 | 73828.1 |
| transcriptional repressor lexa | EJD96_RS10100 | Not Available | - | 2190429 - 2191079 | 23559.6 |
| 30s ribosomal protein s6 | EJD96_RS10105 | Not Available | + | 2191497 - 2191862 | 13729.6 |
| primosomal replication protein n | EJD96_RS10110 | Not Available | + | 2191884 - 2192183 | 10841.1 |
| 30s ribosomal protein s18 | EJD96_RS10115 | Not Available | + | 2192239 - 2192523 | 10979.3 |
| 50s ribosomal protein l9 | EJD96_RS10120 | Not Available | + | 2192550 - 2193002 | 15809.2 |
| replicative dna helicase | EJD96_RS10125 | Not Available | + | 2193207 - 2194652 | 53091.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.