Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| flagellar protein export atpase flii | EJD96_RS10030 | Not Available | - | 2175276 - 2176682 | 50369.9 |
| flagellar assembly protein flih | EJD96_RS10035 | Not Available | - | 2176721 - 2177422 | 26216.1 |
| flagellar motor switch protein flig | EJD96_RS10040 | Not Available | - | 2177476 - 2178471 | 36360.9 |
| flagellar basal-body ms-ring/collar protein flif | EJD96_RS10045 | Not Available | - | 2178464 - 2180245 | 63724.6 |
| flagellar hook-basal body complex protein flie | EJD96_RS10050 | Not Available | + | 2180496 - 2180852 | 12633.2 |
| flagellar brake protein | EJD96_RS10055 | Not Available | - | 2180973 - 2181728 | 28072.0 |
| escu/yscu/hrcu family type iii secretion system export apparatus switch protein | EJD96_RS10060 | Not Available | - | 2181751 - 2182095 | 12560.0 |
| flagellar hook-length control protein flik | EJD96_RS10065 | Not Available | - | 2182082 - 2183266 | 41591.8 |
| flagellar protein flit | EJD96_RS10070 | Not Available | - | 2183269 - 2183598 | 12280.6 |
| flagellar export chaperone flis | EJD96_RS10075 | Not Available | - | 2183604 - 2184068 | 16366.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.