Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| flagellar hook protein flge | EJD96_RS09930 | Not Available | + | 2154373 - 2155671 | 44630.2 |
| flagellar basal-body rod protein flgf | EJD96_RS09935 | Not Available | + | 2155786 - 2156523 | 25581.2 |
| flagellar basal-body rod protein flgg | EJD96_RS09940 | Not Available | + | 2156561 - 2157343 | 27832.7 |
| flagellar basal body l-ring protein flgh | EJD96_RS09945 | Not Available | + | 2157409 - 2158068 | 22816.0 |
| flagellar basal body p-ring protein flgi | EJD96_RS09950 | Not Available | + | 2158107 - 2159237 | 38109.2 |
| flagellar assembly peptidoglycan hydrolase flgj | EJD96_RS09955 | Not Available | + | 2159331 - 2160305 | 35561.1 |
| flagellar hook-associated protein flgk | EJD96_RS09960 | Not Available | + | 2160444 - 2162780 | 79946.6 |
| flagellar hook-associated protein flgl | EJD96_RS09965 | Not Available | + | 2162802 - 2163935 | 40201.1 |
| efflux transporter outer membrane subunit | EJD96_RS09970 | Not Available | - | 2164034 - 2165446 | 51027.9 |
| macb family efflux pump subunit | EJD96_RS09975 | Not Available | - | 2165443 - 2167413 | 70557.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.