Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| flagellar biosynthesis protein flha | EJD96_RS09880 | Not Available | + | 2145571 - 2147688 | 74791.6 |
| flagellar biosynthesis protein flhf | EJD96_RS09885 | Not Available | + | 2147685 - 2149169 | 53251.7 |
| mind/para family protein | EJD96_RS09890 | Not Available | + | 2149204 - 2150004 | 28573.5 |
| rna polymerase sigma factor flia | EJD96_RS09895 | Not Available | + | 2150010 - 2150744 | 27859.1 |
| flagella synthesis protein flgn | EJD96_RS09900 | Not Available | - | 2150835 - 2151293 | 16371.4 |
| flagellar biosynthesis anti-sigma factor flgm | EJD96_RS09905 | Not Available | - | 2151318 - 2151635 | 10729.4 |
| flagellar basal body p-ring formation chaperone flga | EJD96_RS09910 | Not Available | - | 2151813 - 2152550 | 25814.3 |
| flagellar basal body rod protein flgb | EJD96_RS09915 | Not Available | + | 2152761 - 2153189 | 15104.8 |
| flagellar basal body rod protein flgc | EJD96_RS09920 | Not Available | + | 2153196 - 2153600 | 14030.8 |
| flagellar hook assembly protein flgd | EJD96_RS09925 | Not Available | + | 2153611 - 2154333 | 24290.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.