Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | EJD96_RS09735 | Not Available | + | 2118566 - 2119981 | 52122.4 |
| beta-1,6-n-acetylglucosaminyltransferase | EJD96_RS09740 | Not Available | + | 2120041 - 2120943 | 33806.5 |
| udp-glucose dehydrogenase family protein | EJD96_RS09745 | Not Available | + | 2121038 - 2122414 | 49583.6 |
| glycosyltransferase family 2 protein | EJD96_RS09750 | Not Available | + | 2122422 - 2123285 | 33058.5 |
| mop flippase family protein | EJD96_RS09755 | Not Available | + | 2123297 - 2124715 | 52056.2 |
| glycosyltransferase | EJD96_RS09760 | Not Available | + | 2124771 - 2125658 | 33115.8 |
| acyltransferase family protein | EJD96_RS09765 | Not Available | + | 2125679 - 2126617 | 34854.9 |
| beta-1,6-n-acetylglucosaminyltransferase | EJD96_RS09770 | Not Available | - | 2126601 - 2127605 | 38135.5 |
| hypothetical protein | EJD96_RS24080 | Not Available | + | 2127688 - 2127888 | 7362.68 |
| serine acetyltransferase | EJD96_RS09775 | Not Available | + | 2127885 - 2128451 | 20525.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.