Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chain length determinant protein epsf | EJD96_RS09685 | Not Available | + | 2104175 - 2105575 | 50327.2 |
| chain length determinant protein tyrosine kinase epsg | EJD96_RS09690 | Not Available | + | 2105670 - 2106551 | 31865.6 |
| exosortase b | EJD96_RS09695 | Not Available | + | 2106574 - 2108217 | 59133.2 |
| o-antigen ligase family protein | EJD96_RS09700 | Not Available | + | 2108261 - 2109697 | 53808.8 |
| glycosyltransferase family 4 protein | EJD96_RS09705 | Not Available | + | 2109721 - 2110980 | 45943.8 |
| acyltransferase family protein | EJD96_RS09710 | Not Available | + | 2110977 - 2112089 | 41772.7 |
| acyltransferase family protein | EJD96_RS09715 | Not Available | + | 2112184 - 2114172 | 73133.6 |
| atrophin-1 multi-domain protein | EJD96_RS09720 | Not Available | - | 2114251 - 2115621 | 48528.6 |
| glycosyltransferase family 2 protein | EJD96_RS09725 | Not Available | + | 2115899 - 2117089 | 42290.2 |
| wecb/taga/cpsf family glycosyltransferase | EJD96_RS09730 | Not Available | + | 2117076 - 2118293 | 44242.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.