Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phenylalanine--trna ligase subunit alpha | EJD96_RS09635 | Not Available | + | 2093413 - 2094441 | 38093.4 |
| phenylalanine--trna ligase subunit beta | EJD96_RS09640 | Not Available | + | 2094521 - 2096947 | 88461.2 |
| integration host factor subunit alpha | EJD96_RS09645 | Not Available | + | 2097012 - 2097425 | 15370.2 |
| merr family transcriptional regulator | EJD96_RS09650 | Not Available | + | 2097429 - 2097836 | 15594.9 |
| gnat family n-acetyltransferase | EJD96_RS09655 | Not Available | + | 2098042 - 2098545 | 18151.1 |
| phosphatase pap2 family protein | EJD96_RS09660 | Not Available | - | 2098616 - 2099242 | 22508.0 |
| xrtb/pep-cterm-associated polysaccharide biosynthesis outer membrane protein epsl | EJD96_RS09665 | Not Available | + | 2099676 - 2100842 | 43649.9 |
| undecaprenyl-phosphate glucose phosphotransferase | EJD96_RS09670 | Not Available | + | 2100853 - 2102265 | 53388.4 |
| epsd family peptidyl-prolyl cis-trans isomerase | EJD96_RS09675 | Not Available | + | 2102322 - 2103236 | 32867.6 |
| polysaccharide export protein epse | EJD96_RS09680 | Not Available | + | 2103316 - 2104110 | 28519.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.