Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rida family protein | EJD96_RS09585 | Not Available | + | 2085397 - 2085747 | 12617.1 |
| rela/spot family protein | EJD96_RS09590 | Not Available | + | 2085754 - 2088003 | 83767.4 |
| Trna-val | Not Available | Not Available | + | 2088109 - 2088185 | Not Available |
| Trna-val | Not Available | Not Available | + | 2088277 - 2088353 | Not Available |
| response regulator | EJD96_RS09605 | Not Available | + | 2088683 - 2089090 | 14776.2 |
| hypothetical protein | EJD96_RS09610 | Not Available | - | 2089189 - 2089383 | 7537.82 |
| threonine--trna ligase | EJD96_RS09615 | Not Available | + | 2089868 - 2091775 | 72124.8 |
| translation initiation factor if-3 | EJD96_RS09620 | Not Available | + | 2091849 - 2092370 | 19937.4 |
| 50s ribosomal protein l35 | EJD96_RS09625 | Not Available | + | 2092636 - 2092833 | 7422.28 |
| 50s ribosomal protein l20 | EJD96_RS09630 | Not Available | + | 2092859 - 2093221 | 13482.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.