Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | + | 2068998 - 2069073 | Not Available |
| mfs transporter | EJD96_RS09490 | Not Available | + | 2069076 - 2069645 | 19912.5 |
| chemotaxis protein | EJD96_RS09495 | Not Available | + | 2069726 - 2070700 | 35567.7 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | EJD96_RS09500 | Not Available | + | 2070824 - 2071858 | 35706.5 |
| adenosylcobinamide-gdp ribazoletransferase | EJD96_RS09505 | Not Available | + | 2071851 - 2072675 | 29810.0 |
| histidine phosphatase family protein | EJD96_RS09510 | Not Available | + | 2072679 - 2073308 | 23094.7 |
| response regulator | EJD96_RS09515 | Not Available | - | 2073315 - 2073956 | 23261.2 |
| cache domain-containing protein | EJD96_RS09520 | Not Available | - | 2073961 - 2075355 | 50935.0 |
| carbon starvation csta family protein | EJD96_RS09525 | Not Available | + | 2075592 - 2077661 | 74176.3 |
| ybdd/yjix family protein | EJD96_RS09530 | Not Available | + | 2077681 - 2077896 | 8293.05 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.