Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| beta-ketoacyl-acp synthase ii | EJD96_RS09385 | Not Available | + | 2051393 - 2052634 | 43618.1 |
| protein ygfx | EJD96_RS09390 | Not Available | + | 2052716 - 2053216 | 17956.6 |
| rna polymerase sigma factor rpoe | EJD96_RS09395 | Not Available | + | 2053308 - 2053910 | 22957.4 |
| sigma-e factor negative regulatory protein | EJD96_RS09400 | Not Available | + | 2053990 - 2054688 | 24208.4 |
| mucb/rseb c-terminal domain-containing protein | EJD96_RS09405 | Not Available | + | 2054690 - 2055706 | 37260.8 |
| degq family serine endoprotease | EJD96_RS09410 | Not Available | + | 2055721 - 2057199 | 51510.6 |
| glutaredoxin family protein | EJD96_RS09415 | Not Available | + | 2057293 - 2057586 | 10773.8 |
| translation elongation factor 4 | EJD96_RS09420 | Not Available | + | 2057764 - 2059557 | 65752.8 |
| signal peptidase i | EJD96_RS09425 | Not Available | + | 2059559 - 2060473 | 34729.9 |
| ribonuclease iii | EJD96_RS09430 | Not Available | + | 2060667 - 2061626 | 34508.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.