Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| anaphase-promoting protein | EJD96_RS09300 | Not Available | - | 2035077 - 2035700 | 22642.1 |
| serine--trna ligase | EJD96_RS09305 | Not Available | + | 2035890 - 2037191 | 47540.9 |
| ggdef domain-containing protein | EJD96_RS09310 | Not Available | - | 2037304 - 2039184 | 70237.2 |
| Trna-ser | Not Available | Not Available | + | 2039449 - 2039538 | Not Available |
| diguanylate cyclase | EJD96_RS09320 | Not Available | + | 2039846 - 2041603 | 65144.9 |
| laci family dna-binding transcriptional regulator | EJD96_RS09325 | Not Available | - | 2041612 - 2042634 | 36509.1 |
| marr family transcriptional regulator | EJD96_RS09330 | Not Available | - | 2042734 - 2043156 | 16144.3 |
| hpp family protein | EJD96_RS09335 | Not Available | + | 2043313 - 2044509 | 42948.7 |
| hypothetical protein | EJD96_RS24405 | Not Available | + | 2044584 - 2044709 | 4412.61 |
| hypothetical protein | EJD96_RS24075 | Not Available | - | 2044870 - 2045028 | 5978.09 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.