Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin-disulfide reductase | EJD96_RS09250 | Not Available | - | 2019183 - 2020139 | 34026.6 |
| dna translocase ftsk | EJD96_RS09255 | Not Available | + | 2020499 - 2022841 | 85011.5 |
| outer membrane lipoprotein chaperone lola | EJD96_RS09260 | Not Available | + | 2022902 - 2023615 | 25579.4 |
| ferredoxin fdxa | EJD96_RS09265 | Not Available | - | 2023700 - 2024038 | 12332.0 |
| replication-associated recombination protein a | EJD96_RS09270 | Not Available | + | 2024276 - 2025577 | 47829.8 |
| calcium-binding protein | EJD96_RS09275 | Not Available | + | 2025893 - 2032255 | 218907.0 |
| toxin-activating lysine-acyltransferase | EJD96_RS09280 | Not Available | + | 2032273 - 2032695 | 15776.1 |
| toxin-activating lysine-acyltransferase | EJD96_RS09285 | Not Available | + | 2032846 - 2033328 | 18195.9 |
| alanyl-trna editing protein | EJD96_RS09290 | Not Available | - | 2033384 - 2034025 | 22929.5 |
| lysr family transcriptional regulator | EJD96_RS09295 | Not Available | + | 2034123 - 2035070 | 34719.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.