Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gephyrin-like molybdotransferase glp | EJD96_RS09150 | Not Available | - | 1993839 - 1995125 | 45925.4 |
| molybdenum cofactor guanylyltransferase moba | EJD96_RS09155 | Not Available | - | 1995122 - 1995748 | 22422.9 |
| gtp 3',8-cyclase moaa | EJD96_RS09160 | Not Available | - | 1995762 - 1996877 | 40810.1 |
| rne/rng family ribonuclease | EJD96_RS09165 | Not Available | - | 1997175 - 2000363 | 115133.0 |
| rlua family pseudouridine synthase | EJD96_RS09170 | Not Available | + | 2001165 - 2002232 | 39386.3 |
| had-iiia family hydrolase | EJD96_RS09175 | Not Available | + | 2002351 - 2003010 | 24278.1 |
| rieske (2fe-2s) protein | EJD96_RS09180 | Not Available | + | 2003020 - 2003394 | 13313.9 |
| s49 family peptidase | EJD96_RS09185 | Not Available | + | 2003444 - 2004475 | 37236.6 |
| sam-dependent methyltransferase | EJD96_RS09190 | Not Available | - | 2004572 - 2005336 | 26980.7 |
| ppx/gppa phosphatase family protein | EJD96_RS09195 | Not Available | + | 2005539 - 2006996 | 53462.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.