Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | EJD96_RS09050 | Not Available | + | 1974422 - 1975159 | 26449.0 |
| serine o-acetyltransferase | EJD96_RS09055 | Not Available | + | 1975284 - 1976036 | 26438.0 |
| udp-2,3-diacylglucosamine diphosphatase | EJD96_RS09060 | Not Available | - | 1976092 - 1976883 | 28988.3 |
| peptidylprolyl isomerase | EJD96_RS09065 | Not Available | - | 1976914 - 1977402 | 17711.1 |
| peptidylprolyl isomerase | EJD96_RS09070 | Not Available | - | 1977523 - 1978092 | 20343.6 |
| l,d-transpeptidase family protein | EJD96_RS09075 | Not Available | - | 1978089 - 1979306 | 44831.2 |
| nuclear transport factor 2 family protein | EJD96_RS09080 | Not Available | - | 1979343 - 1980887 | 54869.5 |
| cysteine--trna ligase | EJD96_RS09085 | Not Available | + | 1981120 - 1982511 | 51630.2 |
| dna-3-methyladenine glycosylase family protein | EJD96_RS09090 | Not Available | + | 1982513 - 1983172 | 24735.8 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | EJD96_RS09095 | Not Available | + | 1983333 - 1984313 | 35991.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.