Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| metalloprotease pmba | EJD96_RS08950 | Not Available | + | 1953668 - 1955032 | 49029.3 |
| gnat family n-acetyltransferase | EJD96_RS08955 | Not Available | + | 1955108 - 1955599 | 18678.2 |
| mdr family mfs transporter | EJD96_RS08960 | Not Available | + | 1955633 - 1957279 | 58788.6 |
| cryptochrome/photolyase family protein | EJD96_RS08965 | Not Available | - | 1957361 - 1958845 | 55237.8 |
| is1595 family transposase | EJD96_RS08970 | Not Available | - | 1959759 - 1960880 | 43051.7 |
| helix-turn-helix domain-containing protein | EJD96_RS08975 | Not Available | - | 1961156 - 1961554 | 14378.3 |
| 3'-5' exoribonuclease | EJD96_RS08980 | Not Available | - | 1961980 - 1962462 | 18713.2 |
| hypothetical protein | EJD96_RS08985 | Not Available | - | 1962475 - 1962774 | 11353.8 |
| helix-turn-helix domain-containing protein | EJD96_RS08990 | Not Available | + | 1963158 - 1963385 | 8208.11 |
| three-cys-motif partner protein tcmp | EJD96_RS08995 | Not Available | + | 1963526 - 1964380 | 31789.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.