Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2848 domain-containing protein | EJD96_RS08850 | Not Available | - | 1933564 - 1934241 | 24526.1 |
| mfs transporter | EJD96_RS08855 | Not Available | - | 1934297 - 1935610 | 46552.6 |
| lysr family transcriptional regulator | EJD96_RS08860 | Not Available | - | 1935912 - 1936847 | 34832.0 |
| murr/rpir family transcriptional regulator | EJD96_RS08865 | Not Available | + | 1937230 - 1938213 | 34949.9 |
| isoaspartyl peptidase/l-asparaginase family protein | EJD96_RS08870 | Not Available | + | 1938210 - 1939196 | 33713.8 |
| dipeptide abc transporter atp-binding protein | EJD96_RS08875 | Not Available | + | 1939222 - 1941075 | 67774.8 |
| glutathione abc transporter substrate-binding protein gsib | EJD96_RS08880 | Not Available | + | 1941201 - 1942772 | 58596.2 |
| glutathione abc transporter permease gsic | EJD96_RS08885 | Not Available | + | 1942917 - 1943837 | 33908.4 |
| glutathione abc transporter permease gsid | EJD96_RS08890 | Not Available | + | 1943846 - 1944778 | 33661.5 |
| p1 family peptidase | EJD96_RS08895 | Not Available | + | 1944783 - 1945808 | 34990.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.