Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | EJD96_RS08755 | Not Available | - | 1912461 - 1912958 | 18345.2 |
| duf1778 domain-containing protein | EJD96_RS08760 | Not Available | - | 1912909 - 1913229 | 11998.3 |
| mbl fold metallo-hydrolase | EJD96_RS08765 | Not Available | - | 1913440 - 1914504 | 39823.0 |
| tautomerase family protein | EJD96_RS08770 | Not Available | - | 1914663 - 1915046 | 14594.5 |
| lysr family transcriptional regulator | EJD96_RS08775 | Not Available | + | 1915204 - 1916049 | 30242.8 |
| hsp20 family protein | EJD96_RS08780 | Not Available | + | 1916178 - 1916630 | 17246.5 |
| hpt domain-containing protein | EJD96_RS08785 | Not Available | + | 1916878 - 1917246 | 13087.5 |
| hypothetical protein | EJD96_RS08790 | Not Available | - | 1917976 - 1918248 | 9737.86 |
| hypothetical protein | EJD96_RS08795 | Not Available | + | 1918264 - 1918944 | 23803.6 |
| toxin-activating lysine-acyltransferase | EJD96_RS08800 | Not Available | + | 1918949 - 1919434 | 18542.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.