Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJD96_RS08705 | Not Available | + | 1894286 - 1895947 | 60574.4 |
| peptidase domain-containing abc transporter | EJD96_RS08710 | Not Available | + | 1895984 - 1897687 | 61707.1 |
| calcium-binding protein | EJD96_RS08715 | Not Available | + | 1897793 - 1905763 | 262882.0 |
| plp-dependent aminotransferase family protein | EJD96_RS08720 | Not Available | - | 1905793 - 1907295 | 54923.4 |
| threonine dehydratase | EJD96_RS08725 | Not Available | + | 1907462 - 1908517 | 36983.8 |
| lyse family translocator | EJD96_RS08730 | Not Available | + | 1908514 - 1909113 | 21512.4 |
| dmt family transporter | EJD96_RS08735 | Not Available | + | 1909155 - 1910075 | 31770.7 |
| rida family protein | EJD96_RS08740 | Not Available | + | 1910248 - 1910706 | 15954.4 |
| plp-dependent aminotransferase family protein | EJD96_RS08745 | Not Available | + | 1910797 - 1911993 | 43612.0 |
| dhcw motif cupin fold protein | EJD96_RS08750 | Not Available | + | 1912015 - 1912344 | 12185.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.