Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | EJD96_RS08610 | Not Available | + | 1875889 - 1877040 | 41209.7 |
| branched-chain amino acid abc transporter permease | EJD96_RS08615 | Not Available | + | 1877211 - 1878101 | 30713.7 |
| abc transporter permease subunit | EJD96_RS08620 | Not Available | + | 1878106 - 1880073 | 70205.4 |
| abc transporter atp-binding protein | EJD96_RS08625 | Not Available | + | 1880076 - 1880804 | 25853.8 |
| alpha/beta fold hydrolase | EJD96_RS08630 | Not Available | + | 1881007 - 1881798 | 28674.1 |
| hypothetical protein | EJD96_RS08635 | Not Available | - | 1881847 - 1882044 | 7594.94 |
| helix-turn-helix domain-containing protein | EJD96_RS08640 | Not Available | + | 1882103 - 1882618 | 18852.4 |
| Trna-lys | Not Available | Not Available | + | 1882683 - 1882758 | Not Available |
| spermidine synthase | EJD96_RS08650 | Not Available | - | 1882951 - 1883778 | 30892.2 |
| hypothetical protein | EJD96_RS24065 | Not Available | + | 1883905 - 1884069 | 6330.12 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.