Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad(p)/fad-dependent oxidoreductase | EJD96_RS08460 | Not Available | + | 1846717 - 1848009 | 46884.4 |
| duf2891 domain-containing protein | EJD96_RS08465 | Not Available | - | 1848097 - 1849101 | 37971.4 |
| duf979 domain-containing protein | EJD96_RS08470 | Not Available | - | 1849173 - 1850159 | 35277.8 |
| duf969 domain-containing protein | EJD96_RS08475 | Not Available | - | 1850156 - 1850881 | 25921.1 |
| 5-oxoprolinase subunit pxpa | EJD96_RS08480 | Not Available | - | 1851151 - 1851891 | 26306.3 |
| biotin-dependent carboxyltransferase family protein | EJD96_RS08485 | Not Available | - | 1851901 - 1852935 | 36515.2 |
| 5-oxoprolinase subunit pxpb | EJD96_RS08490 | Not Available | - | 1852932 - 1853585 | 23409.1 |
| winged helix dna-binding protein | EJD96_RS08495 | Not Available | + | 1853842 - 1854354 | 18689.7 |
| nad(p)h-quinone oxidoreductase | EJD96_RS08500 | Not Available | + | 1854391 - 1855368 | 34552.0 |
| triose-phosphate isomerase | EJD96_RS08505 | Not Available | + | 1855480 - 1856229 | 25189.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.