Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | EJD96_RS08410 | Not Available | + | 1834698 - 1836044 | 49051.1 |
| sugar kinase | EJD96_RS08415 | Not Available | - | 1836047 - 1836973 | 32596.7 |
| amino acid deaminase | EJD96_RS08420 | Not Available | - | 1836993 - 1838285 | 47188.7 |
| murr/rpir family transcriptional regulator | EJD96_RS08425 | Not Available | + | 1838454 - 1839338 | 31915.1 |
| n-acyl-d-amino-acid deacylase family protein | EJD96_RS08430 | Not Available | + | 1839340 - 1840830 | 53483.4 |
| rida family protein | EJD96_RS08435 | Not Available | + | 1840917 - 1841300 | 13665.3 |
| gntp family permease | EJD96_RS08440 | Not Available | + | 1841463 - 1842815 | 47052.6 |
| hypothetical protein | EJD96_RS08445 | Not Available | - | 1842900 - 1843433 | 20153.0 |
| 30s ribosomal protein s15 | EJD96_RS08450 | Not Available | + | 1843643 - 1843912 | 10021.2 |
| polyribonucleotide nucleotidyltransferase | EJD96_RS08455 | Not Available | + | 1844236 - 1846374 | 76179.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.