Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ketol-acid reductoisomerase | EJD96_RS08360 | Not Available | + | 1824859 - 1825875 | 36527.8 |
| simpl domain-containing protein | EJD96_RS08365 | Not Available | + | 1826100 - 1826888 | 28124.0 |
| hypothetical protein | EJD96_RS08370 | Not Available | + | 1827010 - 1827540 | 19633.5 |
| phosphatidylserine decarboxylase | EJD96_RS08375 | Not Available | + | 1827718 - 1828362 | 23598.7 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | EJD96_RS08380 | Not Available | + | 1828446 - 1829306 | 31656.9 |
| hypothetical protein | EJD96_RS08385 | Not Available | + | 1829474 - 1829965 | 15829.3 |
| alpha/beta fold hydrolase | EJD96_RS08390 | Not Available | - | 1830020 - 1830736 | 25289.4 |
| sensor domain-containing diguanylate cyclase | EJD96_RS08395 | Not Available | - | 1830736 - 1832244 | 57691.6 |
| hypothetical protein | EJD96_RS08400 | Not Available | - | 1832414 - 1832782 | 14090.0 |
| plp-dependent aminotransferase family protein | EJD96_RS08405 | Not Available | + | 1832957 - 1834495 | 56142.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.