Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | EJD96_RS08255 | Not Available | - | 1806978 - 1807871 | 33647.9 |
| agmatinase | EJD96_RS08260 | Not Available | + | 1808010 - 1808963 | 34370.3 |
| gnat family n-acetyltransferase | EJD96_RS08265 | Not Available | - | 1809040 - 1809525 | 17142.8 |
| dead/deah box helicase | EJD96_RS08270 | Not Available | - | 1809556 - 1811118 | 54986.0 |
| alpha/beta fold hydrolase | EJD96_RS08275 | Not Available | - | 1811286 - 1812041 | 27696.0 |
| voc family protein | EJD96_RS08280 | Not Available | - | 1812050 - 1812589 | 19434.1 |
| inositol monophosphatase family protein | EJD96_RS08285 | Not Available | - | 1812689 - 1813486 | 28792.4 |
| rna methyltransferase | EJD96_RS08295 | Not Available | + | 1813799 - 1814626 | 29750.6 |
| pseudouridine synthase | EJD96_RS08300 | Not Available | + | 1814628 - 1815350 | 26770.0 |
| hsp33 family molecular chaperone hslo | EJD96_RS08305 | Not Available | - | 1815438 - 1816367 | 34021.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.